53.81 36607 36607 U 0 unclassified 46.19 31425 171 R 1 root 42.72 29061 169 R1 131567 cellular organisms 42.47 28892 140 D 2 Bacteria 24.01 16335 0 D1 1783270 FCB group 24.01 16335 0 D2 68336 Bacteroidota/Chlorobiota group 24.01 16335 203 P 976 Bacteroidota 23.71 16132 0 C 200643 Bacteroidia 23.71 16132 1790 O 171549 Bacteroidales 8.83 6006 244 F 815 Bacteroidaceae 6.72 4569 2117 G 816 Bacteroides 1.71 1165 1165 S 820 Bacteroides uniformis 1.24 844 823 S 47678 Bacteroides caccae 0.03 21 21 S1 997873 Bacteroides caccae CL03T12C61 0.17 116 116 S 818 Bacteroides thetaiotaomicron 0.14 93 90 S 371601 Bacteroides xylanisolvens 0.00 3 3 S1 657309 Bacteroides xylanisolvens XB1A 0.12 81 81 S 291644 Bacteroides salyersiae 0.10 68 68 S 338188 Bacteroides finegoldii 0.04 24 2 S 46506 Bacteroides stercoris 0.03 22 22 S1 449673 Bacteroides stercoris ATCC 43183 0.02 17 17 S 28116 Bacteroides ovatus 0.02 13 13 S 2650157 Bacteroides zhangwenhongii 0.02 12 10 S 817 Bacteroides fragilis 0.00 2 2 S1 295405 Bacteroides fragilis YCH46 0.01 9 9 S 2792859 Bacteroides humanifaecis 0.01 4 1 G1 2646097 unclassified Bacteroides 0.00 2 2 S 2847299 Bacteroides sp. DH3716P 0.00 1 1 S 2528203 Bacteroides sp. A1C1 0.00 3 3 S 674529 Bacteroides faecis 0.00 2 2 S 2715212 Bacteroides faecium 0.00 1 1 S 1796613 Bacteroides caecimuris 1.75 1193 236 G 909656 Phocaeicola 1.37 929 929 S 821 Phocaeicola vulgatus 0.03 23 23 S 357276 Phocaeicola dorei 0.01 5 5 S 387090 Phocaeicola coprophilus 7.77 5288 13 F 171552 Prevotellaceae 7.47 5081 211 G 2974251 Segatella 7.15 4863 4698 S 165179 Segatella copri 0.24 165 165 S1 537011 Segatella copri DSM 18205 0.01 7 7 S 2518605 Segatella hominis 0.29 194 22 G 577309 Paraprevotella 0.25 167 167 S 454154 Paraprevotella clara 0.01 5 0 S 454155 Paraprevotella xylaniphila 0.01 5 5 S1 762982 Paraprevotella xylaniphila YIT 11841 3.39 2306 1 F 171550 Rikenellaceae 3.39 2305 183 G 239759 Alistipes 1.22 828 0 S 328814 Alistipes shahii 1.22 828 828 S1 717959 Alistipes shahii WAL 8301 1.00 681 0 G1 2608932 unclassified Alistipes 1.00 681 681 S 2662363 Alistipes sp. dk3624 0.33 223 223 S 2585118 Alistipes communis 0.21 141 87 S 214856 Alistipes finegoldii 0.08 54 54 S1 679935 Alistipes finegoldii DSM 17242 0.15 99 91 S 328813 Alistipes onderdonkii 0.01 8 8 S1 2585117 Alistipes onderdonkii subsp. vulgaris 0.12 80 80 S 626932 Alistipes indistinctus 0.07 46 0 S 1470347 Alistipes ihumii 0.07 46 46 S1 1211813 Alistipes ihumii AP11 0.03 23 23 S 1288121 Alistipes senegalensis 0.00 1 0 G1 538948 environmental samples 0.00 1 1 S 538949 uncultured Alistipes sp. 0.62 420 0 F 2005525 Tannerellaceae 0.62 420 88 G 375288 Parabacteroides 0.42 284 284 S 46503 Parabacteroides merdae 0.07 47 47 S 823 Parabacteroides distasonis 0.00 1 1 S 328812 Parabacteroides goldsteinii 0.46 314 0 F 1853231 Odoribacteraceae 0.43 294 0 G 283168 Odoribacter 0.43 294 294 S 28118 Odoribacter splanchnicus 0.03 20 1 G 574697 Butyricimonas 0.02 11 11 S 1472416 Butyricimonas faecihominis 0.01 8 8 S 544645 Butyricimonas virosa 0.01 6 0 F 2005519 Barnesiellaceae 0.01 6 0 G 1348911 Coprobacter 0.01 4 4 S 1099853 Coprobacter fastidiosus 0.00 2 0 S 1501392 Coprobacter secundus 0.00 2 2 S1 2751153 Coprobacter secundus subsp. similis 0.00 2 0 F 2005473 Muribaculaceae 0.00 2 0 G 2518495 Duncaniella 0.00 2 2 S 2518971 Duncaniella dubosii 17.92 12192 70 D1 1783272 Terrabacteria group 15.52 10561 421 P 1239 Bacillota 14.47 9842 664 C 186801 Clostridia 8.68 5906 1 O 3085636 Lachnospirales 8.68 5905 552 F 186803 Lachnospiraceae 5.71 3883 0 G 1766253 Agathobacter 5.71 3883 3797 S 39491 Agathobacter rectalis 0.09 62 62 S1 657317 Agathobacter rectalis M104/1 0.04 24 24 S1 657318 Agathobacter rectalis DSM 17629 0.69 467 0 G 2569097 Anaerobutyricum 0.69 467 467 S 39488 Anaerobutyricum hallii 0.31 211 33 G 572511 Blautia 0.14 94 0 S 418240 Blautia wexlerae 0.14 94 94 S1 1121115 Blautia wexlerae DSM 19850 0.11 72 9 S 40520 Blautia obeum 0.07 46 46 S1 657314 Blautia obeum A2-162 0.02 17 17 S1 411459 Blautia obeum ATCC 29174 0.01 6 6 S 89014 Blautia luti 0.01 5 0 G1 2648079 unclassified Blautia 0.01 5 5 S 2479767 Blautia sp. SC05B48 0.00 1 0 S 53443 Blautia hydrogenotrophica 0.00 1 1 S1 476272 Blautia hydrogenotrophica DSM 10507 0.28 190 0 G 207244 Anaerostipes 0.28 190 190 S 649756 Anaerostipes hadrus 0.21 144 0 G 189330 Dorea 0.16 108 108 S 88431 Dorea longicatena 0.05 36 36 S 39486 Dorea formicigenerans 0.13 90 0 G 2316020 Mediterraneibacter 0.12 85 24 S 33039 [Ruminococcus] torques 0.09 61 61 S1 657313 [Ruminococcus] torques L2-14 0.01 4 4 S 33038 Mediterraneibacter gnavus 0.00 1 0 S 46228 [Ruminococcus] lactaris 0.00 1 1 S1 471875 [Ruminococcus] lactaris ATCC 29176 0.13 88 0 G 33042 Coprococcus 0.08 52 52 S 116085 Coprococcus catus 0.05 36 36 S 410072 Coprococcus comes 0.11 78 0 G 28050 Lachnospira 0.11 78 78 S 39485 Lachnospira eligens 0.11 77 0 G 2944152 Wujia 0.11 77 77 S 2763670 Wujia chipingensis 0.08 53 4 G 841 Roseburia 0.04 29 29 S 301301 Roseburia hominis 0.03 19 16 S 166486 Roseburia intestinalis 0.00 2 2 S1 718255 Roseburia intestinalis XB6B4 0.00 1 1 S1 657315 Roseburia intestinalis M50/1 0.00 1 1 S 2763062 Roseburia rectibacter 0.07 46 2 G 2719313 Enterocloster 0.04 27 27 S 208479 Enterocloster bolteae 0.02 17 0 S 333367 Enterocloster asparagiformis 0.02 17 17 S1 518636 [Clostridium] asparagiforme DSM 15981 0.02 13 0 G 2944193 Simiaoa 0.02 13 13 S 2763672 Simiaoa sunii 0.01 8 0 G 830 Butyrivibrio 0.01 8 8 S 45851 Butyrivibrio crossotus 0.00 2 0 G 1506553 Lachnoclostridium 0.00 2 2 S 29347 [Clostridium] scindens 0.00 2 0 G 248744 Marvinbryantia 0.00 2 0 S 168384 Marvinbryantia formatexigens 0.00 2 2 S1 478749 Marvinbryantia formatexigens DSM 14469 0.00 1 0 G 2944198 Wansuia 0.00 1 1 S 2763667 Wansuia hejianensis 4.80 3264 41 O 186802 Eubacteriales 4.69 3192 231 F 216572 Oscillospiraceae 3.50 2381 1369 G 216851 Faecalibacterium 1.16 789 770 S 853 Faecalibacterium prausnitzii 0.02 17 17 S1 718252 Faecalibacterium prausnitzii L2-6 0.00 2 2 S1 657322 Faecalibacterium prausnitzii SL3/3 0.32 221 45 G1 2646395 unclassified Faecalibacterium 0.09 63 63 S 2929493 Faecalibacterium sp. I3-3-89 0.09 62 62 S 2929491 Faecalibacterium sp. HTF-F 0.04 27 27 S 2929490 Faecalibacterium sp. I2-3-92 0.02 12 12 S 2929489 Faecalibacterium sp. IP-3-29 0.01 5 5 S 2929494 Faecalibacterium sp. I4-1-79 0.01 4 4 S 2929492 Faecalibacterium sp. I3-3-33 0.00 2 2 S 2929495 Faecalibacterium sp. I4-3-84 0.00 1 1 S 2929488 Faecalibacterium sp. IP-1-18 0.00 2 2 S 411483 Faecalibacterium duncaniae 0.57 385 5 G 2892396 Vescimonas 0.55 373 373 S 2714355 Vescimonas coprocola 0.01 7 7 S 2714353 Vescimonas fastidiosa 0.11 73 0 G 244127 Anaerotruncus 0.11 73 73 S 169435 Anaerotruncus colihominis 0.08 57 0 G 946234 Flavonifractor 0.08 57 57 S 292800 Flavonifractor plautii 0.03 21 0 G 2172004 Lawsonibacter 0.03 21 21 S 2108523 Lawsonibacter asaccharolyticus 0.02 11 0 G 2591381 Dysosmobacter 0.02 11 11 S 2093857 Dysosmobacter welbionis 0.01 9 0 G 1905344 Ruthenibacterium 0.01 9 9 S 1550024 Ruthenibacterium lactatiformans 0.01 8 0 G 459786 Oscillibacter 0.01 5 0 G1 2629304 unclassified Oscillibacter 0.01 5 5 S 2109687 Oscillibacter sp. PEA192 0.00 3 3 S 2763056 Oscillibacter hominis 0.01 7 0 G 2892397 Pusillibacter 0.01 7 7 S 2714358 Pusillibacter faecalis 0.01 7 0 G 1263 Ruminococcus 0.01 6 4 G1 2608920 unclassified Ruminococcus 0.00 2 2 S 657323 Ruminococcus sp. SR1/5 0.00 1 1 S 1161942 Ruminococcus champanellensis 0.00 1 0 G 292632 Subdoligranulum 0.00 1 1 S 214851 Subdoligranulum variabile 0.00 1 0 G 2842531 Solibaculum 0.00 1 1 S 2780922 Solibaculum mannosilyticum 0.02 17 0 F 3085642 Butyricicoccaceae 0.02 16 0 G 1928820 Intestinibacillus 0.02 16 0 G1 2635293 unclassified Intestinibacillus 0.02 16 16 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.00 1 0 G 580596 Butyricicoccus 0.00 1 0 G1 2633649 unclassified Butyricicoccus 0.00 1 1 S 2109686 Butyricicoccus sp. GAM44 0.01 6 0 F 31979 Clostridiaceae 0.01 6 0 G 1485 Clostridium 0.01 6 0 G1 2614128 unclassified Clostridium 0.01 6 6 S 411486 Clostridium sp. M62/1 0.01 4 0 F 186806 Eubacteriaceae 0.01 4 0 G 1730 Eubacterium 0.00 2 2 S 39496 Eubacterium ventriosum 0.00 1 1 S 53442 Eubacterium callanderi 0.00 1 0 G1 2624479 unclassified Eubacterium (in: firmicutes) 0.00 1 1 S 2841528 Eubacterium sp. MSJ-33 0.00 2 0 F 3047432 Maliibacteriaceae 0.00 2 0 G 3047433 Maliibacterium 0.00 2 2 S 2086585 Maliibacterium massiliense 0.00 2 0 O1 538999 Eubacteriales incertae sedis 0.00 2 0 G 1392389 Intestinimonas 0.00 2 2 S 1297617 Intestinimonas butyriciproducens 0.01 8 0 O 3082720 Peptostreptococcales 0.01 7 1 F 186804 Peptostreptococcaceae 0.01 4 0 G 1870884 Clostridioides 0.01 4 4 S 1496 Clostridioides difficile 0.00 2 1 G 1501226 Romboutsia 0.00 1 1 S 1115758 Romboutsia ilealis 0.00 1 0 F 3030910 Anaerovoracaceae 0.00 1 0 G 86331 Mogibacterium 0.00 1 1 S 114527 Mogibacterium diversum 0.17 116 2 C 909932 Negativicutes 0.16 111 0 O 1843489 Veillonellales 0.16 111 2 F 31977 Veillonellaceae 0.16 108 44 G 29465 Veillonella 0.06 39 38 S 29466 Veillonella parvula 0.00 1 1 S1 1316254 Veillonella parvula HSIVP1 0.02 17 17 S 423477 Veillonella rogosae 0.01 6 6 S 39777 Veillonella atypica 0.00 1 1 S 39778 Veillonella dispar 0.00 1 1 S 2682456 Veillonella nakazawae 0.00 1 1 G 39948 Dialister 0.00 3 0 O 909929 Selenomonadales 0.00 3 0 F 1843491 Selenomonadaceae 0.00 3 0 G 158846 Megamonas 0.00 3 3 S 437897 Megamonas funiformis 0.14 98 0 C 91061 Bacilli 0.14 96 3 O 186826 Lactobacillales 0.11 77 0 F 1300 Streptococcaceae 0.09 64 33 G 1301 Streptococcus 0.04 27 27 S 1304 Streptococcus salivarius 0.00 1 1 G1 2608887 unclassified Streptococcus 0.00 1 1 S 28037 Streptococcus mitis 0.00 1 1 S 1313 Streptococcus pneumoniae 0.00 1 1 S 45634 Streptococcus cristatus 0.02 13 7 G 1357 Lactococcus 0.01 6 6 S 1358 Lactococcus lactis 0.02 15 0 F 186828 Carnobacteriaceae 0.02 15 2 G 117563 Granulicatella 0.02 12 12 S 46124 Granulicatella adiacens 0.00 1 1 S 137732 Granulicatella elegans 0.00 1 0 F 33958 Lactobacillaceae 0.00 1 0 G 46255 Weissella 0.00 1 1 S 1583 Weissella confusa 0.00 2 0 O 1385 Bacillales 0.00 2 0 F 539738 Gemellaceae 0.00 2 0 G 1378 Gemella 0.00 1 1 S 29391 Gemella morbillorum 0.00 1 1 S 84135 Gemella sanguinis 0.12 84 0 C 526524 Erysipelotrichia 0.12 84 1 O 526525 Erysipelotrichales 0.12 83 3 F 2810280 Coprobacillaceae 0.11 75 0 G 2678885 Faecalibacillus 0.11 75 75 S 1982626 Faecalibacillus intestinalis 0.01 5 0 G 3025755 Thomasclavelia 0.00 3 3 S 1522 [Clostridium] innocuum 0.00 2 2 S 1547 Thomasclavelia ramosa 2.29 1561 5 P 201174 Actinomycetota 1.41 956 2 C 1760 Actinomycetes 1.39 948 0 O 85004 Bifidobacteriales 1.39 948 0 F 31953 Bifidobacteriaceae 1.39 948 251 G 1678 Bifidobacterium 1.00 678 678 S 28026 Bifidobacterium pseudocatenulatum 0.03 18 17 S 1686 Bifidobacterium catenulatum 0.00 1 1 S1 630129 Bifidobacterium catenulatum subsp. kashiwanohense 0.00 1 1 S 1680 Bifidobacterium adolescentis 0.01 5 0 O 2037 Actinomycetales 0.01 5 1 F 2049 Actinomycetaceae 0.00 3 1 G 2529408 Schaalia 0.00 2 2 S 1660 Schaalia odontolytica 0.00 1 1 G 1654 Actinomyces 0.00 1 0 O 85009 Propionibacteriales 0.00 1 0 F 31957 Propionibacteriaceae 0.00 1 0 G 1912216 Cutibacterium 0.00 1 1 S 1747 Cutibacterium acnes 0.88 600 3 C 84998 Coriobacteriia 0.85 578 0 O 84999 Coriobacteriales 0.85 578 0 F 84107 Coriobacteriaceae 0.85 578 0 G 102106 Collinsella 0.85 578 569 S 74426 Collinsella aerofaciens 0.01 9 9 S1 411903 Collinsella aerofaciens ATCC 25986 0.03 19 0 O 1643822 Eggerthellales 0.03 19 2 F 1643826 Eggerthellaceae 0.02 11 2 G 447020 Adlercreutzia 0.01 9 8 S 446660 Adlercreutzia equolifaciens 0.00 1 0 S1 2864143 Adlercreutzia equolifaciens subsp. equolifaciens 0.00 1 1 S2 1384484 Adlercreutzia equolifaciens DSM 19450 0.00 3 0 G 84111 Eggerthella 0.00 3 3 S 84112 Eggerthella lenta 0.00 3 1 G 644652 Gordonibacter 0.00 2 0 S 471189 Gordonibacter pamelaeae 0.00 2 2 S1 657308 Gordonibacter pamelaeae 7-10-1-b 0.31 213 1 P 1224 Pseudomonadota 0.30 207 3 C 1236 Gammaproteobacteria 0.30 201 3 O 91347 Enterobacterales 0.29 198 34 F 543 Enterobacteriaceae 0.24 160 156 G 544 Citrobacter 0.01 4 4 G1 1344959 Citrobacter freundii complex 0.00 3 0 F1 2890311 Klebsiella/Raoultella group 0.00 3 2 G 570 Klebsiella 0.00 1 1 S 1134687 Klebsiella michiganensis 0.00 1 1 G 547 Enterobacter 0.00 2 0 O 135625 Pasteurellales 0.00 2 0 F 712 Pasteurellaceae 0.00 1 1 G 724 Haemophilus 0.00 1 0 G 416916 Aggregatibacter 0.00 1 1 S 732 Aggregatibacter aphrophilus 0.00 1 0 O 2887326 Moraxellales 0.00 1 0 F 468 Moraxellaceae 0.00 1 1 G 469 Acinetobacter 0.01 4 0 C 28211 Alphaproteobacteria 0.00 3 0 O 356 Hyphomicrobiales 0.00 3 0 F 82115 Rhizobiaceae 0.00 3 2 F1 227290 Rhizobium/Agrobacterium group 0.00 1 0 G 357 Agrobacterium 0.00 1 1 S 648995 Agrobacterium pusense 0.00 1 0 O 204458 Caulobacterales 0.00 1 0 F 76892 Caulobacteraceae 0.00 1 0 G 41275 Brevundimonas 0.00 1 1 S 172043 Brevundimonas nasdae 0.00 1 0 C 28216 Betaproteobacteria 0.00 1 0 O 80840 Burkholderiales 0.00 1 0 F 506 Alcaligenaceae 0.00 1 1 G 222 Achromobacter 0.02 11 0 D1 2323 Bacteria incertae sedis 0.02 11 0 D2 1783234 Bacteria candidate phyla 0.02 11 7 P 95818 Candidatus Saccharibacteria 0.01 4 0 C 2093818 Candidatus Saccharimonadia 0.01 4 0 O 2093819 Candidatus Nanosynbacterales 0.01 4 0 F 2093822 Candidatus Nanosynbacteraceae 0.01 4 2 G 2093823 Nanosynbacter 0.00 2 0 G1 2725944 unclassified Candidatus Nanosynbacter 0.00 2 2 S 2899133 Candidatus Nanosynbacter sp. HMT-352 0.00 1 0 P 32066 Fusobacteriota 0.00 1 0 C 203490 Fusobacteriia 0.00 1 0 O 203491 Fusobacteriales 0.00 1 0 F 203492 Fusobacteriaceae 0.00 1 1 G 848 Fusobacterium 3.22 2193 2 D 10239 Viruses 3.22 2191 0 D1 2731341 Duplodnaviria 3.22 2191 0 K 2731360 Heunggongvirae 3.22 2191 0 P 2731618 Uroviricota 3.22 2191 0 C 2731619 Caudoviricetes 3.22 2188 1 O 1978007 Crassvirales 1.54 1049 0 F 2942964 Intestiviridae 1.54 1049 18 F1 2942972 Crudevirinae 1.51 1029 0 G 2948671 Dabirmavirus 1.51 1029 0 S 2955735 Dabirmavirus hominis 1.51 1029 1029 S1 2986400 uncultured phage cr9_1 0.00 2 2 G 2948652 Carjivirus 1.06 720 1 F 2942966 Suoliviridae 0.66 452 0 F1 2942975 Oafivirinae 0.66 452 328 G 2948645 Burzaovirus 0.18 124 0 S 2955562 Burzaovirus intestinihominis 0.18 124 124 S1 2986418 uncultured phage cr29_1 0.39 266 0 F1 2942968 Bearivirinae 0.39 266 236 G 2942989 Afonbuvirus 0.03 20 0 S 2955234 Afonbuvirus intestinihominis 0.03 20 20 S1 2986409 uncultured phage cr12_1 0.01 9 0 S 2955232 Afonbuvirus coli 0.01 9 9 S1 2986408 uncultured phage cr35_1 0.00 1 0 S 2955233 Afonbuvirus faecalis 0.00 1 1 S1 2772085 uncultured phage cr6_1 0.00 1 0 F1 2942969 Boorivirinae 0.00 1 0 G 2942990 Canhaevirus 0.00 1 0 S 2955579 Canhaevirus hiberniae 0.00 1 1 S1 2772066 uncultured phage cr10_1 0.58 396 0 F 2942963 Crevaviridae 0.58 396 0 F1 2942971 Coarsevirinae 0.58 396 42 G 2948774 Junduvirus 0.52 354 0 S 2956034 Junduvirus communis 0.52 354 354 S1 2986394 uncultured phage cr2_1 0.03 22 0 F 2942965 Steigviridae 0.03 22 0 F1 2942967 Asinivirinae 0.03 22 14 G 2942979 Kahnovirus 0.01 8 0 S 2956047 Kahnovirus oralis 0.01 8 8 S1 2772074 uncultured phage cr85_1 0.00 1 0 G 2733190 Lughvirus 0.00 1 0 S 2734248 Lughvirus lugh 0.00 1 1 S1 2070184 Faecalibacterium phage FP_Lugh 0.00 1 0 G 2733134 Taranisvirus 0.00 1 0 S 2734146 Taranisvirus taranis 0.00 1 1 S1 2070186 Faecalibacterium phage FP_Taranis 0.00 1 0 G 2733138 Toutatisvirus 0.00 1 0 S 2734150 Toutatisvirus toutatis 0.00 1 1 S1 2070187 Faecalibacterium phage FP_Toutatis