36.70 5187 5187 U 0 unclassified 63.30 8946 8 R 1 root 61.32 8666 24 R1 131567 cellular organisms 61.14 8641 32 D 2 Bacteria 52.98 7487 26 D1 1783272 Terrabacteria group 52.62 7437 128 P 1239 Bacillota 31.71 4481 151 C 186801 Clostridia 23.60 3335 0 O 3085636 Lachnospirales 23.60 3335 200 F 186803 Lachnospiraceae 12.71 1797 6 G 2316020 Mediterraneibacter 8.37 1183 1183 S 33038 Mediterraneibacter gnavus 4.27 603 603 S 33039 [Ruminococcus] torques 0.04 5 0 S 46228 [Ruminococcus] lactaris 0.04 5 5 S1 471875 [Ruminococcus] lactaris ATCC 29176 3.17 448 59 G 572511 Blautia 2.60 368 0 S 418240 Blautia wexlerae 2.60 368 368 S1 1121115 Blautia wexlerae DSM 19850 0.09 13 13 S 1912897 Blautia argi 0.03 4 0 S 40520 Blautia obeum 0.01 2 2 S1 411459 Blautia obeum ATCC 29174 0.01 2 2 S1 657314 Blautia obeum A2-162 0.01 1 0 S 1322 Blautia hansenii 0.01 1 1 S1 537007 Blautia hansenii DSM 20583 0.01 1 1 S 33035 Blautia producta 0.01 1 1 S 89014 Blautia luti 0.01 1 1 S 2877527 Blautia parvula 2.27 321 4 G 189330 Dorea 2.24 317 317 S 88431 Dorea longicatena 2.01 284 34 G 2719313 Enterocloster 1.68 237 237 S 208479 Enterocloster bolteae 0.09 13 13 S 1531 Enterocloster clostridioformis 1.80 254 3 G 207244 Anaerostipes 1.71 241 239 S 649756 Anaerostipes hadrus 0.01 2 2 S1 649757 Anaerostipes hadrus ATCC 29173 = JCM 17467 0.05 7 4 S 105841 Anaerostipes caccae 0.02 3 3 S1 411490 Anaerostipes caccae L1-92 0.02 3 3 S 1229621 Anaerostipes rhamnosivorans 0.09 13 1 G 841 Roseburia 0.08 12 0 S 166486 Roseburia intestinalis 0.08 12 12 S1 718255 Roseburia intestinalis XB6B4 0.09 13 0 G 1506553 Lachnoclostridium 0.09 13 13 S 29347 [Clostridium] scindens 0.02 3 0 G 33042 Coprococcus 0.01 1 1 S 116085 Coprococcus catus 0.01 1 1 S 410072 Coprococcus comes 0.01 1 0 G1 2684943 unclassified Coprococcus 0.01 1 1 S 751585 Coprococcus sp. ART55/1 0.01 2 0 G 1766253 Agathobacter 0.01 2 2 S 39491 Agathobacter rectalis 6.86 970 3 O 186802 Eubacteriales 6.74 952 22 F 216572 Oscillospiraceae 4.66 658 0 G 1905344 Ruthenibacterium 4.66 658 658 S 1550024 Ruthenibacterium lactatiformans 1.34 189 2 G 1263 Ruminococcus 1.30 184 184 S 1160721 Ruminococcus bicirculans (ex Wegman et al. 2014) 0.01 2 0 G1 2608920 unclassified Ruminococcus 0.01 2 2 S 657323 Ruminococcus sp. SR1/5 0.01 1 0 S 1264 Ruminococcus albus 0.01 1 1 S1 697329 Ruminococcus albus 7 = DSM 20455 0.46 65 0 G 946234 Flavonifractor 0.46 65 65 S 292800 Flavonifractor plautii 0.06 8 2 G 216851 Faecalibacterium 0.03 4 2 S 853 Faecalibacterium prausnitzii 0.01 2 2 S1 718252 Faecalibacterium prausnitzii L2-6 0.01 1 1 S 411483 Faecalibacterium duncaniae 0.01 1 0 G1 2646395 unclassified Faecalibacterium 0.01 1 1 S 2929493 Faecalibacterium sp. I3-3-89 0.05 7 0 G 244127 Anaerotruncus 0.05 7 7 S 169435 Anaerotruncus colihominis 0.01 2 0 G 2892397 Pusillibacter 0.01 2 2 S 2714358 Pusillibacter faecalis 0.01 1 0 G 459786 Oscillibacter 0.01 1 0 G1 2629304 unclassified Oscillibacter 0.01 1 1 S 2109687 Oscillibacter sp. PEA192 0.11 15 0 F 31979 Clostridiaceae 0.10 14 0 G 1649459 Hungatella 0.10 14 8 S 154046 Hungatella hathewayi 0.04 6 6 S1 742737 Hungatella hathewayi WAL-18680 0.01 1 0 G 1485 Clostridium 0.01 1 0 G1 2614128 unclassified Clostridium 0.01 1 1 S 411486 Clostridium sp. M62/1 0.18 25 0 O 3082720 Peptostreptococcales 0.18 25 1 F 186804 Peptostreptococcaceae 0.16 22 0 G 1870884 Clostridioides 0.16 22 22 S 1496 Clostridioides difficile 0.01 2 2 G 1501226 Romboutsia 18.76 2651 0 C 909932 Negativicutes 18.76 2651 0 O 1843489 Veillonellales 18.76 2651 0 F 31977 Veillonellaceae 18.76 2651 128 G 29465 Veillonella 17.84 2522 2519 S 29466 Veillonella parvula 0.02 3 3 S1 1316254 Veillonella parvula HSIVP1 0.01 1 1 S 423477 Veillonella rogosae 0.90 127 0 C 526524 Erysipelotrichia 0.90 127 0 O 526525 Erysipelotrichales 0.88 124 0 F 2810280 Coprobacillaceae 0.88 124 0 G 3025755 Thomasclavelia 0.61 86 86 S 1547 Thomasclavelia ramosa 0.18 26 26 S 1522 [Clostridium] innocuum 0.08 12 0 S 29348 Thomasclavelia spiroformis 0.08 12 12 S1 428126 Thomasclavelia spiroformis DSM 1552 0.01 2 0 F 128827 Erysipelotrichaceae 0.01 1 0 G 2679910 Intestinibaculum 0.01 1 1 S 2487118 Intestinibaculum porci 0.01 1 0 G 2749267 Amedibacterium 0.01 1 1 S 2583452 Amedibacterium intestinale 0.01 1 0 F 2810281 Turicibacteraceae 0.01 1 1 G 191303 Turicibacter 0.35 49 0 C 91061 Bacilli 0.34 48 2 O 186826 Lactobacillales 0.27 38 0 F 1300 Streptococcaceae 0.27 38 30 G 1301 Streptococcus 0.01 2 2 S 1302 Streptococcus gordonii 0.01 2 1 S 28037 Streptococcus mitis 0.01 1 1 S1 365659 Streptococcus mitis B6 0.01 1 1 S 1433513 Streptococcus gwangjuense 0.01 1 1 G1 2608887 unclassified Streptococcus 0.01 1 0 S 45634 Streptococcus cristatus 0.01 1 1 S1 889201 Streptococcus cristatus ATCC 51100 0.01 1 1 S 1318 Streptococcus parasanguinis 0.04 6 0 F 186828 Carnobacteriaceae 0.04 6 0 G 117563 Granulicatella 0.04 6 6 S 46124 Granulicatella adiacens 0.01 2 0 F 81852 Enterococcaceae 0.01 2 1 G 1350 Enterococcus 0.01 1 1 S 44008 Enterococcus cecorum 0.01 1 0 O 1385 Bacillales 0.01 1 0 F 539738 Gemellaceae 0.01 1 0 G 1378 Gemella 0.01 1 1 S 29391 Gemella morbillorum 0.01 1 0 C 1737404 Tissierellia 0.01 1 0 O 1737405 Tissierellales 0.01 1 0 F 1570339 Peptoniphilaceae 0.01 1 0 G 543311 Parvimonas 0.01 1 1 S 33033 Parvimonas micra 0.17 24 0 P 201174 Actinomycetota 0.12 17 0 C 84998 Coriobacteriia 0.11 16 0 O 1643822 Eggerthellales 0.11 16 1 F 1643826 Eggerthellaceae 0.11 15 1 G 644652 Gordonibacter 0.09 13 13 S 1335613 Gordonibacter urolithinfaciens 0.01 1 0 S 471189 Gordonibacter pamelaeae 0.01 1 1 S1 657308 Gordonibacter pamelaeae 7-10-1-b 0.01 1 0 O 84999 Coriobacteriales 0.01 1 0 F 84107 Coriobacteriaceae 0.01 1 0 G 102106 Collinsella 0.01 1 1 S 74426 Collinsella aerofaciens 0.05 7 0 C 1760 Actinomycetes 0.04 6 0 O 2037 Actinomycetales 0.04 6 1 F 2049 Actinomycetaceae 0.04 5 1 G 1654 Actinomyces 0.03 4 4 S 1852377 Actinomyces pacaensis 0.01 1 0 O 85007 Mycobacteriales 0.01 1 0 F 1653 Corynebacteriaceae 0.01 1 0 G 1716 Corynebacterium 0.01 1 1 S 61592 Corynebacterium durum 6.42 907 0 D1 1783270 FCB group 6.42 907 0 D2 68336 Bacteroidota/Chlorobiota group 6.42 907 7 P 976 Bacteroidota 6.37 900 0 C 200643 Bacteroidia 6.37 900 55 O 171549 Bacteroidales 4.77 674 13 F 815 Bacteroidaceae 4.16 588 40 G 816 Bacteroides 3.82 540 532 S 817 Bacteroides fragilis 0.06 8 8 S1 295405 Bacteroides fragilis YCH46 0.02 3 3 S 28116 Bacteroides ovatus 0.01 2 2 S 47678 Bacteroides caccae 0.01 1 1 S 818 Bacteroides thetaiotaomicron 0.01 1 1 S 28111 Bacteroides eggerthii 0.01 1 1 S 674529 Bacteroides faecis 0.52 73 20 G 909656 Phocaeicola 0.37 52 52 S 821 Phocaeicola vulgatus 0.01 1 1 S 357276 Phocaeicola dorei 1.00 141 0 F 2005525 Tannerellaceae 1.00 141 101 G 375288 Parabacteroides 0.28 39 39 S 823 Parabacteroides distasonis 0.01 1 1 S 46503 Parabacteroides merdae 0.17 24 0 F 1853231 Odoribacteraceae 0.14 20 0 G 283168 Odoribacter 0.14 20 20 S 28118 Odoribacter splanchnicus 0.03 4 0 G 574697 Butyricimonas 0.03 4 4 S 2093856 Butyricimonas faecalis 0.02 3 0 F 171550 Rikenellaceae 0.02 3 0 G 239759 Alistipes 0.01 1 1 S 214856 Alistipes finegoldii 0.01 1 0 S 1470347 Alistipes ihumii 0.01 1 1 S1 1211813 Alistipes ihumii AP11 0.01 1 1 S 2585118 Alistipes communis 0.02 3 0 F 2005519 Barnesiellaceae 0.02 3 0 G 1348911 Coprobacter 0.02 3 0 S 1501392 Coprobacter secundus 0.02 3 3 S1 2751153 Coprobacter secundus subsp. similis 1.03 145 0 D1 1783257 PVC group 1.03 145 0 P 74201 Verrucomicrobiota 1.03 145 0 C 203494 Verrucomicrobiae 1.03 145 0 O 48461 Verrucomicrobiales 1.03 145 0 F 1647988 Akkermansiaceae 1.03 145 3 G 239934 Akkermansia 1.00 142 142 S 239935 Akkermansia muciniphila 0.49 69 0 P 1224 Pseudomonadota 0.47 66 0 C 1236 Gammaproteobacteria 0.46 65 4 O 91347 Enterobacterales 0.42 59 36 F 543 Enterobacteriaceae 0.09 13 0 F1 2890311 Klebsiella/Raoultella group 0.09 13 11 G 570 Klebsiella 0.01 2 2 S 571 Klebsiella oxytoca 0.05 7 7 G 544 Citrobacter 0.01 2 2 G 547 Enterobacter 0.01 1 1 G 561 Escherichia 0.01 2 0 F 1903414 Morganellaceae 0.01 2 0 G 581 Morganella 0.01 2 2 S 582 Morganella morganii 0.01 1 0 O 72274 Pseudomonadales 0.01 1 0 F 135621 Pseudomonadaceae 0.01 1 0 G 286 Pseudomonas 0.01 1 0 G1 136841 Pseudomonas aeruginosa group 0.01 1 1 S 287 Pseudomonas aeruginosa 0.02 3 0 C 28211 Alphaproteobacteria 0.01 2 0 O 356 Hyphomicrobiales 0.01 1 0 F 41294 Nitrobacteraceae 0.01 1 1 G 374 Bradyrhizobium 0.01 1 0 F 82115 Rhizobiaceae 0.01 1 1 F1 227290 Rhizobium/Agrobacterium group 0.01 1 0 O 204458 Caulobacterales 0.01 1 0 F 76892 Caulobacteraceae 0.01 1 0 G 41275 Brevundimonas 0.01 1 1 S 293 Brevundimonas diminuta 0.01 1 0 D1 2323 Bacteria incertae sedis 0.01 1 0 D2 1783234 Bacteria candidate phyla 0.01 1 1 P 95818 Candidatus Saccharibacteria 0.01 1 0 D 2759 Eukaryota 0.01 1 0 D1 33154 Opisthokonta 0.01 1 0 K 33208 Metazoa 0.01 1 0 K1 6072 Eumetazoa 0.01 1 0 K2 33213 Bilateria 0.01 1 0 K3 33511 Deuterostomia 0.01 1 0 P 7711 Chordata 0.01 1 0 P1 89593 Craniata 0.01 1 0 P2 7742 Vertebrata 0.01 1 0 P3 7776 Gnathostomata 0.01 1 0 P4 117570 Teleostomi 0.01 1 0 P5 117571 Euteleostomi 0.01 1 0 P6 8287 Sarcopterygii 0.01 1 0 P7 1338369 Dipnotetrapodomorpha 0.01 1 0 P8 32523 Tetrapoda 0.01 1 0 P9 32524 Amniota 0.01 1 0 C 40674 Mammalia 0.01 1 0 C1 32525 Theria 0.01 1 0 C2 9347 Eutheria 0.01 1 0 C3 1437010 Boreoeutheria 0.01 1 0 C4 314146 Euarchontoglires 0.01 1 0 O 9443 Primates 0.01 1 0 O1 376913 Haplorrhini 0.01 1 0 O2 314293 Simiiformes 0.01 1 0 O3 9526 Catarrhini 0.01 1 0 O4 314295 Hominoidea 0.01 1 0 F 9604 Hominidae 0.01 1 0 F1 207598 Homininae 0.01 1 0 G 9605 Homo 0.01 1 1 S 9606 Homo sapiens 1.92 272 0 D 10239 Viruses 1.92 272 0 D1 2731341 Duplodnaviria 1.92 272 0 K 2731360 Heunggongvirae 1.92 272 0 P 2731618 Uroviricota 1.92 272 0 C 2731619 Caudoviricetes 1.92 272 0 O 1978007 Crassvirales 1.83 259 0 F 2942963 Crevaviridae 1.83 259 0 F1 2942973 Doltivirinae 1.83 259 0 G 2948785 Kingevirus 1.83 259 0 S 2956060 Kingevirus communis 1.83 259 259 S1 2986396 uncultured phage cr13_1 0.04 5 0 F 2942964 Intestiviridae 0.04 5 0 F1 2942972 Crudevirinae 0.04 5 0 G 2948671 Dabirmavirus 0.04 5 0 S 2955735 Dabirmavirus hominis 0.04 5 5 S1 2986400 uncultured phage cr9_1 0.03 4 0 F 2942965 Steigviridae 0.03 4 1 F1 2942967 Asinivirinae 0.02 3 0 G 2948812 Mahlunavirus 0.02 3 0 S 2956179 Mahlunavirus rarus 0.02 3 3 S1 2772076 uncultured phage cr128_1 0.03 4 0 F 2942966 Suoliviridae 0.03 4 0 F1 2942968 Bearivirinae 0.03 4 3 G 2942989 Afonbuvirus 0.01 1 0 S 2955233 Afonbuvirus faecalis 0.01 1 1 S1 2772085 uncultured phage cr6_1