4.51 28725 28725 U 0 unclassified 95.49 608812 23 R 1 root 95.49 608776 283 R1 131567 cellular organisms 95.44 608483 13136 D 2 Bacteria 91.28 581939 0 D1 1783270 FCB group 91.28 581939 0 D2 68336 Bacteroidota/Chlorobiota group 91.28 581939 2828 P 976 Bacteroidota 90.84 579111 3 C 200643 Bacteroidia 90.84 579108 36235 O 171549 Bacteroidales 79.49 506748 23806 F 815 Bacteroidaceae 47.27 301350 129881 G 816 Bacteroides 13.17 83960 83960 S 818 Bacteroides thetaiotaomicron 7.67 48927 47964 S 47678 Bacteroides caccae 0.15 963 963 S1 997873 Bacteroides caccae CL03T12C61 1.93 12278 12278 S 28116 Bacteroides ovatus 1.41 9001 9001 S 820 Bacteroides uniformis 1.13 7231 3189 G1 2646097 unclassified Bacteroides 0.42 2661 2661 S 2763022 Bacteroides sp. M10 0.21 1309 1309 S 556259 Bacteroides sp. D2 0.01 51 51 S 3117552 Bacteroides sp. MSB163 0.00 19 19 S 2785531 Bacteroides sp. HF-162 0.00 2 2 S 2528203 Bacteroides sp. A1C1 0.96 6151 6151 S 291645 Bacteroides nordii 0.25 1606 1586 S 817 Bacteroides fragilis 0.00 20 20 S1 862962 Bacteroides fragilis 638R 0.22 1403 1402 S 371601 Bacteroides xylanisolvens 0.00 1 1 S1 657309 Bacteroides xylanisolvens XB1A 0.04 279 279 S 2650158 Bacteroides luhongzhouii 0.03 179 179 S 2650157 Bacteroides zhangwenhongii 0.03 162 162 S 2792859 Bacteroides humanifaecis 0.03 161 161 S 674529 Bacteroides faecis 0.01 60 60 S 1796613 Bacteroides caecimuris 0.01 39 12 S 46506 Bacteroides stercoris 0.00 27 27 S1 449673 Bacteroides stercoris ATCC 43183 0.00 28 28 S 291644 Bacteroides salyersiae 0.00 2 2 S 338188 Bacteroides finegoldii 0.00 1 1 S 246787 Bacteroides cellulosilyticus 0.00 1 1 S 2715212 Bacteroides faecium 28.48 181592 38103 G 909656 Phocaeicola 17.89 114036 114036 S 821 Phocaeicola vulgatus 4.62 29453 29180 S 357276 Phocaeicola dorei 0.04 273 273 S1 997877 Phocaeicola dorei CL03T12C01 3.21 20453 0 F 171550 Rikenellaceae 3.21 20453 2286 G 239759 Alistipes 1.71 10920 9114 S 214856 Alistipes finegoldii 0.28 1806 1806 S1 679935 Alistipes finegoldii DSM 17242 0.84 5354 5238 S 328813 Alistipes onderdonkii 0.02 116 116 S1 2585117 Alistipes onderdonkii subsp. vulgaris 0.28 1779 0 S 328814 Alistipes shahii 0.28 1779 1779 S1 717959 Alistipes shahii WAL 8301 0.01 73 73 S 1288121 Alistipes senegalensis 0.00 18 18 S 2364787 Alistipes megaguti 0.00 12 0 G1 538948 environmental samples 0.00 12 12 S 538949 uncultured Alistipes sp. 0.00 6 6 S 2585118 Alistipes communis 0.00 3 0 S 1470347 Alistipes ihumii 0.00 3 3 S1 1211813 Alistipes ihumii AP11 0.00 2 2 S 626932 Alistipes indistinctus 1.49 9473 2 F 2005525 Tannerellaceae 1.49 9471 3253 G 375288 Parabacteroides 0.80 5079 5079 S 46503 Parabacteroides merdae 0.16 999 999 S 823 Parabacteroides distasonis 0.02 134 134 S 387661 Parabacteroides johnsonii 0.00 6 6 S 328812 Parabacteroides goldsteinii 0.96 6112 3 F 1853231 Odoribacteraceae 0.96 6108 0 G 283168 Odoribacter 0.96 6108 6108 S 28118 Odoribacter splanchnicus 0.00 1 0 G 574697 Butyricimonas 0.00 1 1 S 1472417 Butyricimonas paravirosa 0.01 80 4 F 171552 Prevotellaceae 0.01 45 11 G 838 Prevotella 0.01 33 33 S 28128 Prevotella corporis 0.00 1 1 S 28132 Prevotella melaninogenica 0.00 22 10 G 2974251 Segatella 0.00 7 7 S 2518605 Segatella hominis 0.00 5 5 S 165179 Segatella copri 0.00 8 0 G 2974257 Hoylesella 0.00 8 8 S 28127 Hoylesella buccalis 0.00 1 0 G 577309 Paraprevotella 0.00 1 0 S 454155 Paraprevotella xylaniphila 0.00 1 1 S1 762982 Paraprevotella xylaniphila YIT 11841 0.00 7 0 F 171551 Porphyromonadaceae 0.00 7 2 G 836 Porphyromonas 0.00 3 0 S 28123 Porphyromonas asaccharolytica 0.00 3 3 S1 879243 Porphyromonas asaccharolytica DSM 20707 0.00 2 2 S 322095 Porphyromonas somerae 1.87 11932 50 D1 1783272 Terrabacteria group 1.77 11281 274 P 1239 Bacillota 1.68 10741 640 C 186801 Clostridia 0.83 5293 131 O 186802 Eubacteriales 0.80 5100 157 F 216572 Oscillospiraceae 0.61 3909 3235 G 216851 Faecalibacterium 0.07 447 435 S 853 Faecalibacterium prausnitzii 0.00 6 6 S1 657322 Faecalibacterium prausnitzii SL3/3 0.00 6 6 S1 718252 Faecalibacterium prausnitzii L2-6 0.03 208 94 G1 2646395 unclassified Faecalibacterium 0.01 45 45 S 2929489 Faecalibacterium sp. IP-3-29 0.01 36 36 S 2929493 Faecalibacterium sp. I3-3-89 0.00 16 16 S 2929490 Faecalibacterium sp. I2-3-92 0.00 11 11 S 2929495 Faecalibacterium sp. I4-3-84 0.00 2 2 S 2929488 Faecalibacterium sp. IP-1-18 0.00 2 2 S 2929492 Faecalibacterium sp. I3-3-33 0.00 1 1 S 2929491 Faecalibacterium sp. HTF-F 0.00 1 1 S 2929494 Faecalibacterium sp. I4-1-79 0.00 19 19 S 411483 Faecalibacterium duncaniae 0.10 651 0 G 946234 Flavonifractor 0.10 651 651 S 292800 Flavonifractor plautii 0.04 255 0 G 1905344 Ruthenibacterium 0.04 255 255 S 1550024 Ruthenibacterium lactatiformans 0.01 66 0 G 244127 Anaerotruncus 0.01 66 66 S 169435 Anaerotruncus colihominis 0.01 36 0 G 459786 Oscillibacter 0.00 31 31 S 2763056 Oscillibacter hominis 0.00 5 0 G1 2629304 unclassified Oscillibacter 0.00 5 5 S 2109687 Oscillibacter sp. PEA192 0.00 10 0 G 2172004 Lawsonibacter 0.00 10 10 S 2108523 Lawsonibacter asaccharolyticus 0.00 6 0 G 2591381 Dysosmobacter 0.00 6 6 S 2093857 Dysosmobacter welbionis 0.00 4 1 G 2892396 Vescimonas 0.00 2 2 S 2714355 Vescimonas coprocola 0.00 1 1 S 2714353 Vescimonas fastidiosa 0.00 4 0 G 1263 Ruminococcus 0.00 4 1 G1 2608920 unclassified Ruminococcus 0.00 3 3 S 657323 Ruminococcus sp. SR1/5 0.00 2 0 G 2892397 Pusillibacter 0.00 2 2 S 2714358 Pusillibacter faecalis 0.01 52 0 F 31979 Clostridiaceae 0.00 27 3 G 1485 Clostridium 0.00 24 0 G1 2614128 unclassified Clostridium 0.00 24 24 S 411486 Clostridium sp. M62/1 0.00 25 0 G 1649459 Hungatella 0.00 25 9 S 154046 Hungatella hathewayi 0.00 16 16 S1 742737 Hungatella hathewayi WAL-18680 0.00 9 0 F 3085642 Butyricicoccaceae 0.00 7 0 G 1928820 Intestinibacillus 0.00 7 0 G1 2635293 unclassified Intestinibacillus 0.00 7 7 S 3079303 Intestinibacillus sp. NTUH-41-i26 0.00 2 0 G 580596 Butyricicoccus 0.00 2 0 G1 2633649 unclassified Butyricicoccus 0.00 2 2 S 2109686 Butyricicoccus sp. GAM44 0.00 1 0 O1 538999 Eubacteriales incertae sedis 0.00 1 0 G 1392389 Intestinimonas 0.00 1 1 S 1297617 Intestinimonas butyriciproducens 0.74 4744 0 O 3085636 Lachnospirales 0.74 4744 493 F 186803 Lachnospiraceae 0.27 1695 9 G 2316020 Mediterraneibacter 0.19 1222 1222 S 33038 Mediterraneibacter gnavus 0.07 462 459 S 33039 [Ruminococcus] torques 0.00 3 3 S1 657313 [Ruminococcus] torques L2-14 0.00 2 0 S 46228 [Ruminococcus] lactaris 0.00 2 2 S1 471875 [Ruminococcus] lactaris ATCC 29176 0.13 829 0 G 207244 Anaerostipes 0.13 829 826 S 649756 Anaerostipes hadrus 0.00 3 3 S1 649757 Anaerostipes hadrus ATCC 29173 = JCM 17467 0.12 742 134 G 572511 Blautia 0.05 323 0 S 418240 Blautia wexlerae 0.05 323 323 S1 1121115 Blautia wexlerae DSM 19850 0.04 260 4 S 40520 Blautia obeum 0.04 243 243 S1 411459 Blautia obeum ATCC 29174 0.00 13 13 S1 657314 Blautia obeum A2-162 0.00 13 13 S 89014 Blautia luti 0.00 5 0 G1 2648079 unclassified Blautia 0.00 5 5 S 2479767 Blautia sp. SC05B48 0.00 3 3 S 1796616 Blautia pseudococcoides 0.00 3 3 S 2877527 Blautia parvula 0.00 1 0 S 1322 Blautia hansenii 0.00 1 1 S1 537007 Blautia hansenii DSM 20583 0.07 437 8 G 2719313 Enterocloster 0.07 415 415 S 208479 Enterocloster bolteae 0.00 13 0 S 333367 Enterocloster asparagiformis 0.00 13 13 S1 518636 [Clostridium] asparagiforme DSM 15981 0.00 1 1 S 1531 Enterocloster clostridioformis 0.05 322 1 G 189330 Dorea 0.04 225 225 S 88431 Dorea longicatena 0.02 96 96 S 39486 Dorea formicigenerans 0.02 107 1 G 33042 Coprococcus 0.01 88 88 S 410072 Coprococcus comes 0.00 17 17 S 116085 Coprococcus catus 0.00 1 1 S 33043 Coprococcus eutactus 0.01 70 0 G 1506553 Lachnoclostridium 0.01 69 69 S 29347 [Clostridium] scindens 0.00 1 1 S 89153 [Clostridium] hylemonae 0.01 39 0 G 841 Roseburia 0.00 27 8 S 166486 Roseburia intestinalis 0.00 19 19 S1 718255 Roseburia intestinalis XB6B4 0.00 12 12 S 301301 Roseburia hominis 0.00 8 0 G 1766253 Agathobacter 0.00 8 8 S 39491 Agathobacter rectalis 0.00 1 0 G 28050 Lachnospira 0.00 1 1 S 39485 Lachnospira eligens 0.00 1 0 G 2569097 Anaerobutyricum 0.00 1 1 S 39488 Anaerobutyricum hallii 0.01 64 0 O 3082720 Peptostreptococcales 0.01 64 6 F 186804 Peptostreptococcaceae 0.01 54 0 G 1870884 Clostridioides 0.01 54 54 S 1496 Clostridioides difficile 0.00 4 4 G 1501226 Romboutsia 0.02 144 0 C 91061 Bacilli 0.02 143 0 O 186826 Lactobacillales 0.02 141 0 F 1300 Streptococcaceae 0.02 141 76 G 1301 Streptococcus 0.01 59 59 S 1304 Streptococcus salivarius 0.00 2 0 S 1303 Streptococcus oralis 0.00 2 2 S1 1458253 Streptococcus oralis subsp. dentisani 0.00 1 0 G1 119603 Streptococcus dysgalactiae group 0.00 1 0 S 1336 Streptococcus equi 0.00 1 1 S1 40041 Streptococcus equi subsp. zooepidemicus 0.00 1 1 S 1343 Streptococcus vestibularis 0.00 1 0 G1 2608887 unclassified Streptococcus 0.00 1 1 S 2759692 Streptococcus sp. Marseille-Q3533 0.00 1 1 S 1302 Streptococcus gordonii 0.00 1 0 F 33958 Lactobacillaceae 0.00 1 1 G 1243 Leuconostoc 0.00 1 0 F 186827 Aerococcaceae 0.00 1 0 G 46123 Abiotrophia 0.00 1 1 S 46125 Abiotrophia defectiva 0.00 1 0 O 1385 Bacillales 0.00 1 0 F 539738 Gemellaceae 0.00 1 0 G 1378 Gemella 0.00 1 1 S 29391 Gemella morbillorum 0.02 96 0 C 526524 Erysipelotrichia 0.02 96 0 O 526525 Erysipelotrichales 0.01 95 1 F 2810280 Coprobacillaceae 0.01 86 0 G 2678885 Faecalibacillus 0.01 86 86 S 1982626 Faecalibacillus intestinalis 0.00 8 0 G 3025755 Thomasclavelia 0.00 7 7 S 1522 [Clostridium] innocuum 0.00 1 1 S 1547 Thomasclavelia ramosa 0.00 1 0 F 128827 Erysipelotrichaceae 0.00 1 0 G 2679910 Intestinibaculum 0.00 1 1 S 2487118 Intestinibaculum porci 0.00 26 0 C 909932 Negativicutes 0.00 23 0 O 1843489 Veillonellales 0.00 23 0 F 31977 Veillonellaceae 0.00 16 0 G 39948 Dialister 0.00 16 16 S 39950 Dialister pneumosintes 0.00 7 2 G 29465 Veillonella 0.00 5 5 S 29466 Veillonella parvula 0.00 2 0 O 1843488 Acidaminococcales 0.00 2 0 F 909930 Acidaminococcaceae 0.00 2 0 G 33024 Phascolarctobacterium 0.00 2 2 S 33025 Phascolarctobacterium faecium 0.00 1 0 O 909929 Selenomonadales 0.00 1 0 F 1843491 Selenomonadaceae 0.00 1 0 G 970 Selenomonas 0.00 1 1 S 2754044 Selenomonas timonae 0.09 601 1 P 201174 Actinomycetota 0.07 438 0 C 1760 Actinomycetes 0.07 436 0 O 85004 Bifidobacteriales 0.07 436 0 F 31953 Bifidobacteriaceae 0.07 436 139 G 1678 Bifidobacterium 0.04 283 283 S 28026 Bifidobacterium pseudocatenulatum 0.00 9 7 S 1686 Bifidobacterium catenulatum 0.00 2 1 S1 630129 Bifidobacterium catenulatum subsp. kashiwanohense 0.00 1 1 S2 1150460 Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854 0.00 5 5 S 216816 Bifidobacterium longum 0.00 1 0 O 85006 Micrococcales 0.00 1 0 F 1268 Micrococcaceae 0.00 1 0 G 32207 Rothia 0.00 1 1 S 43675 Rothia mucilaginosa 0.00 1 0 O 2037 Actinomycetales 0.00 1 0 F 2049 Actinomycetaceae 0.00 1 1 G 2529408 Schaalia 0.03 162 1 C 84998 Coriobacteriia 0.02 96 0 O 1643822 Eggerthellales 0.02 96 1 F 1643826 Eggerthellaceae 0.01 92 7 G 84111 Eggerthella 0.01 85 85 S 84112 Eggerthella lenta 0.00 3 0 G 644652 Gordonibacter 0.00 3 0 S 471189 Gordonibacter pamelaeae 0.00 3 3 S1 657308 Gordonibacter pamelaeae 7-10-1-b 0.01 65 1 O 84999 Coriobacteriales 0.01 64 0 F 84107 Coriobacteriaceae 0.01 64 0 G 102106 Collinsella 0.01 64 63 S 74426 Collinsella aerofaciens 0.00 1 1 S1 411903 Collinsella aerofaciens ATCC 25986 0.22 1377 6 P 1224 Pseudomonadota 0.21 1367 23 C 1236 Gammaproteobacteria 0.19 1180 44 O 91347 Enterobacterales 0.18 1136 618 F 543 Enterobacteriaceae 0.07 456 3 F1 2890311 Klebsiella/Raoultella group 0.07 453 444 G 570 Klebsiella 0.00 7 7 S 573 Klebsiella pneumoniae 0.00 2 2 S 1134687 Klebsiella michiganensis 0.01 59 19 G 561 Escherichia 0.01 40 40 S 562 Escherichia coli 0.00 3 3 G 547 Enterobacter 0.03 164 0 O 135625 Pasteurellales 0.03 164 6 F 712 Pasteurellaceae 0.02 155 8 G 724 Haemophilus 0.02 145 145 S 729 Haemophilus parainfluenzae 0.00 1 1 S 727 Haemophilus influenzae 0.00 1 1 S 735 Haemophilus parahaemolyticus 0.00 2 2 G 416916 Aggregatibacter 0.00 1 0 G 713 Actinobacillus 0.00 1 1 S 189834 Actinobacillus porcitonsillarum 0.00 4 0 C 28211 Alphaproteobacteria 0.00 3 0 O 204458 Caulobacterales 0.00 3 0 F 76892 Caulobacteraceae 0.00 3 2 G 41275 Brevundimonas 0.00 1 1 S 293 Brevundimonas diminuta 0.00 1 0 O 356 Hyphomicrobiales 0.00 1 0 F 82115 Rhizobiaceae 0.00 1 0 F1 227290 Rhizobium/Agrobacterium group 0.00 1 0 G 357 Agrobacterium 0.00 1 1 S 648995 Agrobacterium pusense 0.01 90 0 D1 1783257 PVC group 0.01 90 0 P 74201 Verrucomicrobiota 0.01 90 0 C 203494 Verrucomicrobiae 0.01 90 0 O 48461 Verrucomicrobiales 0.01 90 0 F 1647988 Akkermansiaceae 0.01 90 0 G 239934 Akkermansia 0.01 83 0 G1 2608915 unclassified Akkermansia 0.01 83 83 S 3115151 Akkermansia sp. AE01SA01 0.00 7 7 S 239935 Akkermansia muciniphila 0.00 5 0 D1 2323 Bacteria incertae sedis 0.00 5 0 D2 1783234 Bacteria candidate phyla 0.00 5 2 P 95818 Candidatus Saccharibacteria 0.00 3 0 C 2093818 Candidatus Saccharimonadia 0.00 3 0 O 2093819 Candidatus Nanosynbacterales 0.00 3 0 F 2093822 Candidatus Nanosynbacteraceae 0.00 3 0 G 2093823 Nanosynbacter 0.00 3 0 G1 2725944 unclassified Candidatus Nanosynbacter 0.00 3 3 S 2899133 Candidatus Nanosynbacter sp. HMT-352 0.00 4 0 P 200940 Thermodesulfobacteriota 0.00 3 0 C 3031449 Desulfovibrionia 0.00 3 0 O 213115 Desulfovibrionales 0.00 3 0 F 194924 Desulfovibrionaceae 0.00 3 0 G 872 Desulfovibrio 0.00 3 3 S 876 Desulfovibrio desulfuricans 0.00 1 0 C 3031451 Desulfobulbia 0.00 1 0 O 3024411 Desulfobulbales 0.00 1 0 F 213121 Desulfobulbaceae 0.00 1 0 G 893 Desulfobulbus 0.00 1 1 S 1986146 Desulfobulbus oralis 0.00 10 2 D 2759 Eukaryota 0.00 8 0 D1 33154 Opisthokonta 0.00 8 0 K 33208 Metazoa 0.00 8 0 K1 6072 Eumetazoa 0.00 8 0 K2 33213 Bilateria 0.00 8 0 K3 33511 Deuterostomia 0.00 8 0 P 7711 Chordata 0.00 8 0 P1 89593 Craniata 0.00 8 0 P2 7742 Vertebrata 0.00 8 0 P3 7776 Gnathostomata 0.00 8 0 P4 117570 Teleostomi 0.00 8 0 P5 117571 Euteleostomi 0.00 8 0 P6 8287 Sarcopterygii 0.00 8 0 P7 1338369 Dipnotetrapodomorpha 0.00 8 0 P8 32523 Tetrapoda 0.00 8 0 P9 32524 Amniota 0.00 8 0 C 40674 Mammalia 0.00 8 0 C1 32525 Theria 0.00 8 0 C2 9347 Eutheria 0.00 8 0 C3 1437010 Boreoeutheria 0.00 8 0 C4 314146 Euarchontoglires 0.00 8 0 O 9443 Primates 0.00 8 0 O1 376913 Haplorrhini 0.00 8 0 O2 314293 Simiiformes 0.00 8 0 O3 9526 Catarrhini 0.00 8 0 O4 314295 Hominoidea 0.00 8 0 F 9604 Hominidae 0.00 8 0 F1 207598 Homininae 0.00 8 0 G 9605 Homo 0.00 8 8 S 9606 Homo sapiens 0.00 13 0 D 10239 Viruses 0.00 13 0 D1 2731341 Duplodnaviria 0.00 13 0 K 2731360 Heunggongvirae 0.00 13 0 P 2731618 Uroviricota 0.00 13 0 C 2731619 Caudoviricetes 0.00 13 0 O 1978007 Crassvirales 0.00 10 0 F 2942966 Suoliviridae 0.00 7 0 F1 2942968 Bearivirinae 0.00 7 7 G 2942989 Afonbuvirus 0.00 3 0 F1 2942975 Oafivirinae 0.00 3 3 G 2948645 Burzaovirus 0.00 3 0 F 2942965 Steigviridae 0.00 3 3 F1 2942967 Asinivirinae